selC

cmscan-Rfam

Family :

tRNA-Sec

Id:

RF01852

Type:

Gene; tRNA;

Taxonomy:

Eukaryota; Bacteria; Viruses; Archaea;

Ontology:

GO:0030533 triplet codon-amino acid adaptor activity

Description:

not description

Score:

81.7

E-value:

2.2e-18

From sequence:

1

To sequence:

91

Alignments:

                                                                                                          NC
             (((((((((,,<<<<<<____>>>>>><<<<<<_______>>>>>>,<<<<<________>>>>>,.,<<<<_______>>>>))))))))) CS
  RF01852  1 GggggggcgaucggcccUGGUgggccguccGGgCUUCAAAcCCggaGggggcuagcaacggccccg.GggGGUUCGAUUCCcccgccccccC 91
             GG::G::C: UCG:C:C GGUG:G:CG:C:GG:CUUCAAA:CC:G: GGG:C + CA+CGG:CCCG G::GGUUCGA UCC:::G::C::CC
     selC  1 GGAAGAUCG-UCGUCUCCGGUGAGGCGGCUGGACUUCAAAUCCAGUUGGGGCCGCCAGCGGUCCCGgGCAGGUUCGACUCCUGUGAUCUUCC 91
             *********.9********************************************************************************* PP

RNAfold
>selC
GAAGAUCGUCGUCUCCGGUGAGGCGGCUGGACUUCAAAUCCAGUUGGGGC
CGCCAGCGGUCCCGGGCAGGUUCGACUCCUGUGAUCUUCC
(((((((..((((((....))))))((((((.......))))))((((((((....)))))))).(((((.......)))))))))))). (-41.40)

Length sequence

: 90

Length match:

89