sraD,

cmscan-Rfam

Family :

MicA

Id:

RF00078

Type:

Gene; sRNA;

Taxonomy:

Eukaryota; Bacteria;

Ontology:

GO:0003729 mRNA bindingRF00078

Description:

not description

Score:

84.7

E-value:

5.1e-15

From sequence:

2

To sequence:

74

Alignments:

                                                                                         NC
             :::::::::::::::::::::::<<<<-<<<_____>>>->>>>--------<<<<<<<_____>>>>>>>:::: CS
  RF00078  1 GAAAGACGCGCAUUUGUUAUCAUCAUCCcUguuuuucAgAGAUGUUUAuUUUGGCCACcguaaagGUGGCCUUUU 75
             GAAAGACGCGCAUUUGUUAUCAUCAUCCCUG+ UU+CAGAGAUG   AUUUUGGCCAC: +   :GUGGCCUUUU
    sraD,  2 GAAAGACGCGCAUUUGUUAUCAUCAUCCCUGAAUUCCAGAGAUGAA-AUUUUGGCCACUCA-CGAGUGGCCUUUU 74
             ********************************************65.68899*******88.67*********** PP

RNAfold
>sraD,
gaaagacgcgcauuuguuaucaucaucccugaauuccagagaugaaauuu
uggccacucacgaguggccuuuuu
......................(((((.(((.....))).)))))......(((((((....)))))))..... (-19.90)

Length sequence

: 74

Length match:

71