chr35_13

cmsearch-Rfam

Family :

mir-574

Id:

RF00929

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00929

Description:

not description

Score:

42.7

E-value:

0.00019

From sequence:

1386623

To sequence:

1386701

Alignments:

                             v   v                  v       v                    v v              NC
                  <<<<<<<<<<<<-<-<<<<<<<<<<<<<<<<<--<<_____>>--..>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>:: CS
  RF00929       1 cGcGGGCGuGuGAGUGuGuGuGuguGaGuGuGUGuCGCUCGGgUC..CaCgCuCaugCaCaCaCCCaCaCGCCCgCgCu 77     
                  :G  :G   G:  GU UGUGUGU::G:G:GUGUG :G  C : U   CAC:C:C::GCACACA C :C   C:  C: +
    chr35 1386623 UGUGUGUGUGUGUGUGUGUGUGUGCGUGGGUGUGUGGUGCACUUUggCACCCACGCGCACACAACAGCGUGCAUGCAAC 1386701
                  ********************************997766664444334******************************** PP

>>

RNAfold
>chr35_13
GUGUGUGUGUGUGUGUGUGUGUGCGUGGGUGUGUGGUGCACUUUGGCACC
CACGCGCACACAACAGCGUGCAUGCAAC
.(((((((((((...((((((((((((((((((((...)))....)))))))))))))))))...))))))))))).. (-44.50)

Length sequence

: 78

Length match:

77