chr4_52

cmsearch-Rfam

Family :

mir-877

Id:

RF00912

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00912

Description:

not description

Score:

29.1

E-value:

0.0096

From sequence:

65860

To sequence:

65776

Alignments:

                                                                                                       NC
                :::<<<<<<--<<-<-<<<<<<<<<_____________________________________>>>>>>>>>->->>>>>>>>:::: CS
  RF00912     1 GUAGAGGaGAUGGCGCAgGGGAcacGGGcuAAGacUUGGGGgUuucUGGgACCcUuagACAUgugUCCUcUUCUCCCuCCUCCcAG 86   
                G AG::GAGA :G G : : G :::G+G      + UG G G UUCU    CC+U+   C U::: C : :UCUC:CUC::C C G
     chr4 65860 GGAGGAGAGAGAGAGAGGGGGGGGGGAGUGUGCGUGUGCGCGCUUCUCUC-CCUUCCUCCCUCCCUCUCUCUCUCUCUCUCCUCCG 65776
                ***************99999999998888888788888888888888777.888888888889999999999************** PP

RNAfold
>chr4_52
CGGAGGAGAGAGAGAGAGAGAGGGAGGGAGGAAGGGAGAGAAGCGCGCAC
ACGCACACUCCCCCCCCCCUCUCUCUCUCUCCUCCG
((((((((((((((((((...(((.(((.....(((((....(((......)))...))))))))))))))))))))))))))))) (-55.90)

Length sequence

: 86

Length match:

83