chr5_16

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

33.1

E-value:

0.0011

From sequence:

119963

To sequence:

119871

Alignments:

                     v                                                                   v                NC
                 :<<<<<-<<<<<<<<<<<<<<<<-.<<<<<-<---<__~~~~~~>-->>>>>>>>>>>>>.>>>>>>>>>->>>>>:::::::::::: CS
  RF00772      1 UGGggcaGggGGGcaGgggGGGcU.cAgGgAGAAAgua*[ 4]*cagCcCcUggCCCccc.CugCCCccCCgccCCcugUuccaaaau 84    
                  G:G :+::GGGG::G:G:GG::  :AG:GA   AGUA      C + C:CU:::CC:C: C::CCCC::C: C:CCU UUC +   U
     chr5 119963 AGAGAAGACGGGGGGGGGCGGAGAgAAGAGAGCGAGUA*[11]*CCAUCUCUUCUCCGCUuCCCCCCCGUCUCCUCCUCUUCACCUCU 119871
                 *****************999999757888888877765...9..7778899999999995499999********************** PP

>>

RNAfold
>chr5_16
GAGGUGAAGAGGAGGAGACGGGGGGGAAGCGGAGAAGAGAUGGCCACCGU
CACUUACUCGCUCUCUUCUCUCCGCCCCCCCCCGUCUUCUCU
..........((((((((((((((((..(((((((.((((.(((...............))).)))).))))))).)))))))))))))))) (-53.50)

Length sequence

: 92

Length match:

91